In this paper, we show the asymptotic limit for the 3D Boussinesq system with zero viscosity limit or zero diffusivity limit. By the classical energy method, we prove that as viscosity(or diffusivity) coefficient goes to zero the solutions of the fully viscous equations converges to those of zero viscosity(or zero diffusivity) equations, which extend the previous results on the asymptotic limit under the conditions of the zero parameter(zero viscosity ν = 0 or zero diffusivity η = 0) in 2D case separately.